Appletree
=========

Github page: https://github.com/XENONnT/appletree

Appletree stands for "a high-performance program simulates and fits response of xenon".
It's a software framework of fitting response of liquid xenon detector, based on
`jax <https://jax.readthedocs.io/en/latest/>`_ and affine invariant MCMC ensemble sampler
using `emcee <https://emcee.readthedocs.io/en/stable/>`_.

.. toctree::
    :maxdepth: 1
    :caption: Installation

    installation.rst

.. toctree::
    :maxdepth: 1
    :caption: Basics

    basics/general.rst
    basics/plugin.rst
    basics/component.rst
    basics/likelihood.rst
    basics/context.rst

.. toctree::
    :maxdepth: 1
    :caption: Advanced techniques

    advance/parameter.rst
    advance/instruct.rst
    advance/map.rst
    advance/file.rst

.. toctree::
    :maxdepth: 1
    :caption: Example notebooks

    notebooks/component.ipynb
    notebooks/likelihood.ipynb
    notebooks/context.ipynb
    notebooks/benchmark.ipynb
    notebooks/datastructure.ipynb
    notebooks/maps.ipynb

.. toctree::
    :maxdepth: 2
    :caption: Release notes

    reference/release_notes

Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`